- Predicted Gene MLOC_45190
MLOC_45190 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_45190_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_45190_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.59532 | 16.6415 | 8.41221 | 12.7241 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.7609 | 11.8909 | 9.4418 | 9.59373 |
INF1 | Young developing inflorescences (5mm) | 36.2349 | 28.1021 | 33.5342 | 26.3954 |
INF2 | Developing inflorescences (1-1.5 cm) | 26.4305 | 21.0564 | 20.8304 | 25.4605 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.89382 | 11.1763 | 2.10778 | 11.2322 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.89946 | 7.81529 | 10.0294 | 27.4157 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.5146 | 12.9862 | 8.93009 | 11.713 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.05976 | 5.56218 | 3.81268 | 11.4453 |
CDS Structure of MLOC_45190
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_45190.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g07080.1 |
+2 |
3e-47 |
164 |
81/86 (94%) |
13106.m00735 protein pre-mRNA-processing-splicing factor 8, putative, expressed |
TAIR PP10 |
AT1G80070.1 |
+2 |
3e-47 |
164 |
81/86 (94%) |
| Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359 |