MLOC_4518 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 73.9171 | 58.636 | 69.2307 | 67.5396 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 68.7896 | 70.9523 | 78.0565 | 61.3259 |
| INF1 | Young developing inflorescences (5mm) | 2.07613 | 2.06186 | 1.57672 | 1.76435 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.95226 | 2.51975 | 2.44862 | 2.71885 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 181.734 | 142.626 | 103.012 | 167.229 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 51.1574 | 56.6053 | 54.0102 | 163.485 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 83.511 | 92.6811 | 83.593 | 92.0143 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.925 | 7.02685 | 5.76099 | 15.0271 |
CDS Structure of MLOC_4518
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4518.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g16670.1 |
-2 |
3e-162 |
467 |
248/282 (88%) |
13103.m01979 protein haloacid dehalogenase-like hydrolase family protein, putative, expressed |
| TAIR PP10 |
AT5G02230.2 |
-2 |
1e-110 |
334 |
180/282 (64%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:449132-450507 FORWARD LENGTH=280 |
