MLOC_45173 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.335672.655893.086743.78512
LEAShoots from the seedlings (10 cm shoot stage)2.097253.025643.289962.26239
INF1Young developing inflorescences (5mm)0.3079140.4417940.5062340.350702
INF2Developing inflorescences (1-1.5 cm)0.2733450.1808630.4201390.293162
ROORoots from the seedlings (10 cm shoot stage)13.70614.562234.728596.84817
NODDeveloping tillers at six leaf stage, 3rd internode5.348366.93224.8490318.3044
CAR5Developing grain, bracts removed (5 DPA)0.8318650.7146250.7621580.735806
CAR15Developing grain, bracts removed (15 DPA)0.5997450.763820.8771141.7493



CDS Structure of MLOC_45173






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45173.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45173.2CUST_6339_PI427708083AvailableAvailablecontig_276601 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g51540.1 -3 1e-18 87 61/75 (81%) 13101.m05379 protein cytidine/deoxycytidylate deaminase, putative, expressed
TAIR PP10None-----