MLOC_45142 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3044610.01503960.4247040.240449
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)1.183931.214542.274581.66869
INF2Developing inflorescences (1-1.5 cm)1.679911.456833.696532.97572
ROORoots from the seedlings (10 cm shoot stage)1.047761.055132.737091.99798
NODDeveloping tillers at six leaf stage, 3rd internode0.8607120.4863121.899313.50379
CAR5Developing grain, bracts removed (5 DPA)0.9493520.754210.69681.04327
CAR15Developing grain, bracts removed (15 DPA)0.7989390.5841880.7248681.72068



CDS Structure of MLOC_45142






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45142.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45142.1CUST_12478_PI427708083AvailableAvailablecontig_276469 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g06440.1 +1 2e-23 97 45/58 (78%) 13108.m00654 protein secretory carrier-associated membrane protein 5, putative, expressed
TAIR PP10None-----