- Predicted Gene MLOC_45140
MLOC_45140 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 26.0619 | 20.0096 | 19.864 | 25.5641 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.2153 | 1.3429 | 1.77887 | 3.899 |
| INF1 | Young developing inflorescences (5mm) | 57.7414 | 59.0344 | 48.3607 | 55.692 |
| INF2 | Developing inflorescences (1-1.5 cm) | 40.8534 | 57.0554 | 43.6717 | 65.1601 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.11794 | 13.9035 | 15.8633 | 20.6058 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0559946 | 0.114475 | 0.0730645 | 0.421809 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 30.7591 | 31.441 | 35.8048 | 39.9372 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.948137 | 0.557457 | 1.30573 | 2.42482 |
CDS Structure of MLOC_45140
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_45140.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g35580.1 |
+3 |
7e-173 |
494 |
274/347 (79%) |
13110.m03200 protein ATEB1A-like microtubule associated protein, putative, expressed |
| TAIR PP10 |
AT5G67270.1 |
+3 |
4e-110 |
333 |
196/356 (55%) |
| Symbols: ATEB1C, EB1C, ATEB1H1 | end binding protein 1C | chr5:26840248-26841984 REVERSE LENGTH=329 |