MLOC_4514 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 12.3711 | 7.8364 | 11.0208 | 7.37099 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.92746 | 6.58076 | 8.23675 | 4.6448 |
INF1 | Young developing inflorescences (5mm) | 9.22061 | 10.7355 | 10.9254 | 5.97388 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.03712 | 9.30791 | 6.15947 | 6.18596 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.7198 | 8.41991 | 8.04382 | 7.963 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.27312 | 9.22666 | 10.5064 | 23.7648 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.01437 | 9.42982 | 9.78068 | 6.25964 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.57231 | 2.88913 | 4.10677 | 5.45092 |
CDS Structure of MLOC_4514
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4514.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g47790.3 |
-3 |
5e-55 |
199 |
99/110 (90%) |
13103.m05153 protein transposon protein, putative, unclassified, expressed |
TAIR PP10 |
AT5G03470.1 |
-3 |
1e-41 |
158 |
74/108 (69%) |
| Symbols: ATB ALPHA | Protein phosphatase 2A regulatory B subunit family protein | chr5:866795-868872 FORWARD LENGTH=495 |