MLOC_4512 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.5742 | 10.0627 | 12.6849 | 11.4942 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.0046 | 21.741 | 24.4305 | 17.2627 |
| INF1 | Young developing inflorescences (5mm) | 11.045 | 13.1683 | 13.8304 | 11.3229 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.1409 | 13.7175 | 14.7549 | 15.9085 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.1661 | 15.9737 | 11.6816 | 18.4426 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.9819 | 16.2747 | 18.4857 | 58.5129 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.234 | 9.51668 | 10.7408 | 9.95126 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.4709 | 6.37061 | 5.79446 | 14.13 |
CDS Structure of MLOC_4512
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4512.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g47780.1 |
+2 |
0.0 |
631 |
299/316 (95%) |
13103.m05149 protein WD repeat-containing protein, putative, expressed |
| TAIR PP10 |
AT3G18140.1 |
+2 |
0.0 |
552 |
260/309 (84%) |
Transducin/WD40 repeat-like superfamily protein | chr3:6212743-6214567 REVERSE LENGTH=305 |
