- Predicted Gene MLOC_45112
MLOC_45112 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_45112_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_45112_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 45.7501 | 40.0399 | 50.3347 | 46.349 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 46.4674 | 25.2473 | 24.4236 | 29.0608 |
INF1 | Young developing inflorescences (5mm) | 11.9623 | 12.1053 | 13.2649 | 10.6061 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.20972 | 10.4603 | 12.4423 | 11.6756 |
ROO | Roots from the seedlings (10 cm shoot stage) | 41.2041 | 43.6095 | 52.2486 | 57.8133 |
NOD | Developing tillers at six leaf stage, 3rd internode | 269.709 | 184.853 | 100.865 | 617.15 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.9471 | 19.5225 | 19.8173 | 18.7047 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.67533 | 4.19743 | 4.59957 | 9.44568 |
CDS Structure of MLOC_45112
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_45112.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g20050.1 |
+3 |
4e-129 |
376 |
202/216 (94%) |
13105.m02121 protein ras-related protein, putative, expressed |
TAIR PP10 |
AT3G46830.1 |
+3 |
6e-104 |
311 |
167/217 (77%) |
| Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362 REVERSE LENGTH=217 |