MLOC_45091 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.39546.501165.7511210.2593
LEAShoots from the seedlings (10 cm shoot stage)5.1271314.681412.32211.8703
INF1Young developing inflorescences (5mm)25.960231.043630.311432.6982
INF2Developing inflorescences (1-1.5 cm)25.042625.623930.138638.1998
ROORoots from the seedlings (10 cm shoot stage)21.329413.556918.142122.1475
NODDeveloping tillers at six leaf stage, 3rd internode1.600922.017610.276214.2689
CAR5Developing grain, bracts removed (5 DPA)16.748617.115518.365222.1323
CAR15Developing grain, bracts removed (15 DPA)1.881063.207973.783168.95912



CDS Structure of MLOC_45091






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45091.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45091.1CUST_6327_PI427708083AvailableAvailablecontig_276296 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g03730.1 +1 3e-11 56 24/39 (62%) 13102.m00366 protein SWIB/MDM2 domain containing protein, expressed
TAIR PP10None-----