MLOC_45064 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.993523.588873.602932.52201
LEAShoots from the seedlings (10 cm shoot stage)3.793791.890232.68482.13475
INF1Young developing inflorescences (5mm)5.644315.734248.080974.27243
INF2Developing inflorescences (1-1.5 cm)7.489057.597469.119557.14086
ROORoots from the seedlings (10 cm shoot stage)1.089892.6142.032872.22006
NODDeveloping tillers at six leaf stage, 3rd internode3.354194.704993.5044812.8642
CAR5Developing grain, bracts removed (5 DPA)6.011046.39725.831894.79331
CAR15Developing grain, bracts removed (15 DPA)5.484074.515635.992529.60553



CDS Structure of MLOC_45064






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45064.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45064.4NoneAvailableAvailablecontig_276189 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g29810.3 +1 1e-30 90 50/104 (48%) 13106.m10481 protein lectin protein kinase family protein, putative, expressed
TAIR PP10 AT4G32300.1 +3 4e-20 59 28/39 (72%) | Symbols: SD2-5 | S-domain-2 5 | chr4:15599970-15602435 FORWARD LENGTH=821