MLOC_45046 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains105.0898.1702101.239114.184
LEAShoots from the seedlings (10 cm shoot stage)414.556317.732276.158309.163
INF1Young developing inflorescences (5mm)2.802533.580994.016773.46105
INF2Developing inflorescences (1-1.5 cm)1.064330.7406476.099072.80597
ROORoots from the seedlings (10 cm shoot stage)402.178147.166129.174230.157
NODDeveloping tillers at six leaf stage, 3rd internode257.075299.02775.8788867.176
CAR5Developing grain, bracts removed (5 DPA)118.45282.982231.996788.403
CAR15Developing grain, bracts removed (15 DPA)18.077922.895519.108754.6521



CDS Structure of MLOC_45046






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45046.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354795NoneNoneNoneNone
MLOC_45046.1CUST_2706_PI427708080AvailableAvailablecontig_276113 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g16860.1 -1 0.0 1199 625/651 (96%) 13103.m02005 protein DnaK family protein, putative, expressed
TAIR PP10 AT5G02500.1 -1 0.0 1137 590/655 (90%) | Symbols: HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | heat shock cognate protein 70-1 | chr5:554055-556334 REVERSE LENGTH=651