MLOC_45023 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.850610.338211.345911.848
LEAShoots from the seedlings (10 cm shoot stage)7.08075.575325.847385.60502
INF1Young developing inflorescences (5mm)37.810238.588345.757436.6598
INF2Developing inflorescences (1-1.5 cm)48.326546.849840.947953.8071
ROORoots from the seedlings (10 cm shoot stage)3.845278.514467.1237410.086
NODDeveloping tillers at six leaf stage, 3rd internode1.666473.170318.7977814.9312
CAR5Developing grain, bracts removed (5 DPA)10.059112.761712.341712.1118
CAR15Developing grain, bracts removed (15 DPA)2.840342.91682.861017.19743



CDS Structure of MLOC_45023






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45023.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45023.1CUST_6314_PI427708083AvailableAvailablecontig_276019 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g08330.1 +1 2e-46 166 75/80 (94%) 13111.m00877 protein POLD1 - Putative DNA polymerase delta catalytic subunit, expressed
TAIR PP10 AT5G63960.1 +1 3e-39 145 65/80 (81%) DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases | chr5:25599597-25606672 FORWARD LENGTH=1095