MLOC_4500 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.219839 | 0.505467 | 0.528235 | 0.405133 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.7555 | 39.2615 | 26.637 | 22.0967 |
| INF1 | Young developing inflorescences (5mm) | 1.68427 | 1.44205 | 1.74489 | 1.26727 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.41077 | 1.515 | 3.09957 | 2.2077 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.18285 | 0.347644 | 0.200013 | 0.348073 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.21371 | 0.34303 | 0.375258 | 1.05759 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.895055 | 1.09523 | 0.983611 | 0.895639 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.468537 | 0.404018 | 0.428189 | 0.929648 |
CDS Structure of MLOC_4500
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4500.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g49390.1 |
-2 |
0.0 |
987 |
600/1194 (50%) |
13106.m05282 protein NBS-LRR disease resistance protein, putative, expressed |
| TAIR PP10 |
AT3G14470.1 |
-2 |
1e-51 |
179 |
212/825 (26%) |
NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054 |
