MLOC_44991 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.056622.793222.177321.5593
LEAShoots from the seedlings (10 cm shoot stage)39.01499.2150711.707515.4486
INF1Young developing inflorescences (5mm)12.55516.238045.331266.79489
INF2Developing inflorescences (1-1.5 cm)0.6949850.4604240.4445360.578225
ROORoots from the seedlings (10 cm shoot stage)16.769214.660220.416515.0528
NODDeveloping tillers at six leaf stage, 3rd internode0.4013272.612990.071144.97861
CAR5Developing grain, bracts removed (5 DPA)4.078213.751522.988593.31492
CAR15Developing grain, bracts removed (15 DPA)0.5040520.06289310.493440.814993



CDS Structure of MLOC_44991






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44991.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355531NoneNoneNoneNone
MLOC_44991.1CUST_18046_PI427708080AvailableAvailablecontig_275925 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g26660.1 -1 2e-131 387 201/277 (73%) 13107.m02644 protein aquaporin protein, putative, expressed
TAIR PP10 AT2G16850.1 -1 1e-125 371 194/278 (70%) | Symbols: PIP3B, PIP2;8 | plasma membrane intrinsic protein 2;8 | chr2:7301647-7303180 FORWARD LENGTH=278