MLOC_44974 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.968645.878676.780765.58272
LEAShoots from the seedlings (10 cm shoot stage)5.044922.672743.918342.85029
INF1Young developing inflorescences (5mm)5.248195.761386.985174.20558
INF2Developing inflorescences (1-1.5 cm)6.554248.508727.238456.98912
ROORoots from the seedlings (10 cm shoot stage)8.861467.246596.846786.78208
NODDeveloping tillers at six leaf stage, 3rd internode10.194618.30546.1312935.6933
CAR5Developing grain, bracts removed (5 DPA)12.261312.943911.53829.83715
CAR15Developing grain, bracts removed (15 DPA)4.223014.213224.49058.5861



CDS Structure of MLOC_44974






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44974.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44974.1CUST_6308_PI427708083AvailableAvailablecontig_275895 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10 AT2G47170.1 -2 6e-11 62 28/28 (100%) | Symbols: ARF1A1C | Ras-related small GTP-binding family protein | chr2:19367264-19368518 FORWARD LENGTH=181