- Predicted Gene MLOC_44911
MLOC_44911 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 35.2271 | 26.6869 | 36.1199 | 27.0614 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.57006 | 6.68465 | 8.31004 | 5.76344 |
INF1 | Young developing inflorescences (5mm) | 5.69301 | 5.17751 | 8.0461 | 4.29075 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.45947 | 5.04726 | 4.61685 | 4.22046 |
ROO | Roots from the seedlings (10 cm shoot stage) | 20.3586 | 12.0527 | 14.1243 | 15.0378 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.71871 | 6.31328 | 6.06741 | 19.7924 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.50509 | 6.11867 | 6.07971 | 5.48697 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.627713 | 1.503 | 1.70637 | 2.1471 |
CDS Structure of MLOC_44911
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44911.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g47690.2 |
+1 |
3e-45 |
159 |
81/93 (87%) |
13101.m04935 protein metallo-beta-lactamase family protein, putative, expressed |
TAIR PP10 |
AT1G53580.2 |
+1 |
3e-41 |
148 |
73/93 (78%) |
| Symbols: GLX2-3, ETHE1, GLY3 | glyoxalase II 3 | chr1:19991542-19993250 REVERSE LENGTH=294 |