MLOC_44911 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.227126.686936.119927.0614
LEAShoots from the seedlings (10 cm shoot stage)7.570066.684658.310045.76344
INF1Young developing inflorescences (5mm)5.693015.177518.04614.29075
INF2Developing inflorescences (1-1.5 cm)3.459475.047264.616854.22046
ROORoots from the seedlings (10 cm shoot stage)20.358612.052714.124315.0378
NODDeveloping tillers at six leaf stage, 3rd internode7.718716.313286.0674119.7924
CAR5Developing grain, bracts removed (5 DPA)6.505096.118676.079715.48697
CAR15Developing grain, bracts removed (15 DPA)0.6277131.5031.706372.1471



CDS Structure of MLOC_44911






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44911.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44911.1CUST_12474_PI427708083AvailableAvailablecontig_275697 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g47690.2 +1 3e-45 159 81/93 (87%) 13101.m04935 protein metallo-beta-lactamase family protein, putative, expressed
TAIR PP10 AT1G53580.2 +1 3e-41 148 73/93 (78%) | Symbols: GLX2-3, ETHE1, GLY3 | glyoxalase II 3 | chr1:19991542-19993250 REVERSE LENGTH=294