MLOC_4488 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_4488_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_4488_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 36.1609 | 20.9942 | 21.8622 | 24.5082 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.5935 | 9.0586 | 14.9687 | 11.5305 |
INF1 | Young developing inflorescences (5mm) | 26.8371 | 34.0931 | 37.2425 | 25.6346 |
INF2 | Developing inflorescences (1-1.5 cm) | 26.7269 | 25.3453 | 24.7734 | 26.238 |
ROO | Roots from the seedlings (10 cm shoot stage) | 35.4279 | 20.1456 | 18.443 | 25.8478 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.91319 | 13.7461 | 21.6001 | 42.321 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.5656 | 16.0788 | 15.7745 | 14.626 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.1957 | 11.0155 | 8.62995 | 21.2191 |
CDS Structure of MLOC_4488
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4488.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g08060.1 |
-3 |
3e-44 |
108 |
53/60 (88%) |
13103.m30165 protein elongation factor Tu, putative, expressed |
TAIR PP10 |
AT5G60390.3 |
-3 |
1e-42 |
105 |
50/60 (83%) |
GTP binding Elongation factor Tu family protein | chr5:24289226-24290675 FORWARD LENGTH=449 |