MLOC_44861 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.48516.03418.017717.3773
LEAShoots from the seedlings (10 cm shoot stage)49.807122.102411.006723.8272
INF1Young developing inflorescences (5mm)0.8333981.682781.017991.06461
INF2Developing inflorescences (1-1.5 cm)0.7074010.4426310.5613410.625378
ROORoots from the seedlings (10 cm shoot stage)79.3439.993837.312154.8551
NODDeveloping tillers at six leaf stage, 3rd internode28.446824.533647.117193.2222
CAR5Developing grain, bracts removed (5 DPA)1.358651.40280.8868211.23856
CAR15Developing grain, bracts removed (15 DPA)2.838822.304021.599545.63582



CDS Structure of MLOC_44861






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44861.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364802NoneNoneNoneNone
MLOC_44861.2CUST_2694_PI427708080AvailableAvailablecontig_275564 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g63310.1 -3 3e-156 466 262/510 (51%) 13103.m07017 protein cytochrome P450 71E1, putative, expressed
TAIR PP10 AT3G26300.1 -3 1e-132 404 221/498 (44%) | Symbols: CYP71B34 | cytochrome P450, family 71, subfamily B, polypeptide 34 | chr3:9639199-9640866 REVERSE LENGTH=500