MLOC_44840 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1801560.07690920.2092910.157743
LEAShoots from the seedlings (10 cm shoot stage)0.18245900.2745040.20942
INF1Young developing inflorescences (5mm)2.226952.762782.210962.29885
INF2Developing inflorescences (1-1.5 cm)9.3552311.733713.750214.1543
ROORoots from the seedlings (10 cm shoot stage)0.3316160.176270.1039650.235997
NODDeveloping tillers at six leaf stage, 3rd internode0.1603090.4414030.5789561.50023
CAR5Developing grain, bracts removed (5 DPA)2.763293.051073.391753.4697
CAR15Developing grain, bracts removed (15 DPA)0.1195580.2391320.08720410.453783



CDS Structure of MLOC_44840






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44840.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44840.1CUST_12472_PI427708083AvailableAvailablecontig_275509 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g14180.1 -3 1e-127 379 181/250 (72%) 13101.m01562 protein expressed protein
TAIR PP10None-----