MLOC_44822 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.978416.111419.627518.611
LEAShoots from the seedlings (10 cm shoot stage)0.7034031.421252.003391.18303
INF1Young developing inflorescences (5mm)0.0671990.2186680.2558950.159117
INF2Developing inflorescences (1-1.5 cm)0.03151850.08981850.1221410.0954341
ROORoots from the seedlings (10 cm shoot stage)33.870531.988620.813237.0984
NODDeveloping tillers at six leaf stage, 3rd internode00.024732700.213297
CAR5Developing grain, bracts removed (5 DPA)0.6201540.5726620.691920.595603
CAR15Developing grain, bracts removed (15 DPA)0.3118030.2286760.200530.611895



CDS Structure of MLOC_44822






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44822.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377081NoneNoneNoneNone
MLOC_44822.1CUST_2689_PI427708080AvailableAvailablecontig_275465 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58270.1 -1 1e-175 500 237/289 (82%) 13102.m06750 protein metallo-beta-lactamase family protein, putative, expressed
TAIR PP10 AT4G33540.1 -1 4e-122 364 175/288 (61%) metallo-beta-lactamase family protein | chr4:16130882-16133678 FORWARD LENGTH=355