MLOC_4480 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 20.8992 | 17.0654 | 15.714 | 17.2894 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 22.4835 | 29.1172 | 32.1535 | 22.9109 |
| INF1 | Young developing inflorescences (5mm) | 15.7317 | 18.2512 | 16.1514 | 14.3518 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.5786 | 19.4812 | 17.1291 | 20.4609 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 20.3318 | 20.8018 | 19.3428 | 23.6205 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 21.0816 | 29.4718 | 36.7253 | 92.8697 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 13.6565 | 13.655 | 13.963 | 13.3678 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.95098 | 3.33079 | 3.1033 | 7.55806 |
CDS Structure of MLOC_4480
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4480.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g02710.1 |
-1 |
5e-75 |
237 |
141/161 (88%) |
13107.m00197 protein expressed protein |
| TAIR PP10 |
AT4G33625.2 |
-1 |
6e-56 |
186 |
104/152 (68%) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:16153114-16154543 REVERSE LENGTH=199 |