- Predicted Gene MLOC_44795
MLOC_44795 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 35.4299 | 42.8389 | 46.0947 | 43.6322 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 834.713 | 1848.9 | 2103.56 | 1393.76 |
| INF1 | Young developing inflorescences (5mm) | 6.80091 | 5.02845 | 6.45077 | 5.38968 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.03123 | 2.37728 | 4.13789 | 3.01154 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.917997 | 3.74799 | 12.8044 | 5.27532 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 508.57 | 271.402 | 299.31 | 878.767 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 125.589 | 156.319 | 129.42 | 140.721 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.9072 | 14.1722 | 13.1885 | 30.1814 |
CDS Structure of MLOC_44795
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44795.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g19381.1 |
+3 |
2e-104 |
309 |
144/174 (83%) |
13112.m02058 protein ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G67090.1 |
+3 |
2e-76 |
237 |
114/177 (64%) |
| Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180 |
