MLOC_44794 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.683566.346496.247215.33928
LEAShoots from the seedlings (10 cm shoot stage)8.105375.878077.146545.39365
INF1Young developing inflorescences (5mm)4.750035.024846.784373.99973
INF2Developing inflorescences (1-1.5 cm)5.917165.042234.774715.15933
ROORoots from the seedlings (10 cm shoot stage)7.663548.279685.996828.01473
NODDeveloping tillers at six leaf stage, 3rd internode9.4293510.03398.9673429.1375
CAR5Developing grain, bracts removed (5 DPA)6.392586.695237.434525.65076
CAR15Developing grain, bracts removed (15 DPA)1.894022.03772.0814.0373



CDS Structure of MLOC_44794






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44794.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365159NoneNoneNoneNone
MLOC_44794.2CUST_18044_PI427708080AvailableAvailablecontig_275214 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65200.3 -3 0.0 711 441/545 (81%) 13101.m14968 protein proton-dependent oligopeptide transport, putative, expressed
TAIR PP10 AT1G22540.1 -3 3e-150 453 311/557 (56%) Major facilitator superfamily protein | chr1:7964202-7966222 FORWARD LENGTH=557