- Predicted Gene MLOC_44788
MLOC_44788 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.9092 | 16.7013 | 17.5214 | 14.1878 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.8507 | 15.189 | 18.461 | 13.844 |
| INF1 | Young developing inflorescences (5mm) | 29.9652 | 26.5988 | 26.958 | 21.0373 |
| INF2 | Developing inflorescences (1-1.5 cm) | 34.5887 | 29.4096 | 34.7599 | 30.8915 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.8904 | 21.5292 | 21.6499 | 22.4351 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.45077 | 12.0152 | 16.7141 | 37.1661 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 23.0084 | 24.3687 | 21.7653 | 19.2196 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 15.9036 | 16.199 | 15.7849 | 32.2676 |
CDS Structure of MLOC_44788
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44788.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g03890.1 |
+1 |
7e-149 |
444 |
248/290 (86%) |
13111.m00332 protein RNA recognition motif containing protein, putative, expressed |
| TAIR PP10 |
AT5G66010.1 |
+1 |
3e-77 |
254 |
149/291 (51%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:26399612-26400753 FORWARD LENGTH=255 |