MLOC_44779 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.209427.402426.021724.0741
LEAShoots from the seedlings (10 cm shoot stage)27.020925.774925.523122.7137
INF1Young developing inflorescences (5mm)22.715624.680420.819919.5827
INF2Developing inflorescences (1-1.5 cm)23.302923.838322.808625.9578
ROORoots from the seedlings (10 cm shoot stage)24.775130.449423.975435.5392
NODDeveloping tillers at six leaf stage, 3rd internode26.427831.991432.2436109.012
CAR5Developing grain, bracts removed (5 DPA)27.661924.288525.663125.3421
CAR15Developing grain, bracts removed (15 DPA)17.818617.071117.166640.1198



CDS Structure of MLOC_44779






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44779.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44779.2CUST_12263_PI427708080AvailableAvailablecontig_275350 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g25680.1 +3 0.0 1308 746/1239 (60%) 13107.m02540 protein protein kinase domain containing protein, expressed
TAIR PP10 AT2G35050.1 +3 0.0 746 524/1301 (40%) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain | chr2:14769708-14774796 FORWARD LENGTH=1257