MLOC_4477 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.66577 | 2.84802 | 5.26365 | 3.48939 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.62338 | 0.709809 | 1.75923 | 1.12011 |
| INF1 | Young developing inflorescences (5mm) | 1.91015 | 2.94068 | 4.92 | 2.17569 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.18701 | 2.46263 | 3.50982 | 2.92343 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.84056 | 2.78829 | 1.76319 | 3.17547 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.795 | 8.82679 | 4.61519 | 24.0314 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.78409 | 4.97518 | 5.7786 | 4.03919 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.81717 | 2.281 | 2.85855 | 4.38442 |
CDS Structure of MLOC_4477
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4477.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g59520.3 |
-1 |
1e-25 |
101 |
61/68 (90%) |
13101.m06327 protein cupin, RmlC-type, putative, expressed |
| TAIR PP10 |
AT3G56820.1 |
-1 |
9e-11 |
59 |
41/69 (59%) |
unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr3:21040061-21041711 REVERSE LENGTH=220 |