MLOC_44757 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.280018.291238.025736.99253
LEAShoots from the seedlings (10 cm shoot stage)12.074813.138916.40188.91921
INF1Young developing inflorescences (5mm)9.604189.6092110.58267.75745
INF2Developing inflorescences (1-1.5 cm)10.054210.143911.988510.5854
ROORoots from the seedlings (10 cm shoot stage)8.6439.158618.7166810.4924
NODDeveloping tillers at six leaf stage, 3rd internode12.798117.582717.994932.7553
CAR5Developing grain, bracts removed (5 DPA)10.433711.167310.62688.97526
CAR15Developing grain, bracts removed (15 DPA)4.461564.127593.498758.29122



CDS Structure of MLOC_44757






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44757.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375785NoneNoneNoneNone
MLOC_44757.2CUST_2685_PI427708080AvailableAvailablecontig_275313 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g24570.1 -1 0.0 841 408/485 (84%) 13109.m02332 protein growth regulator related protein, putative, expressed
TAIR PP10 AT4G24530.1 -1 0.0 690 342/491 (70%) O-fucosyltransferase family protein | chr4:12667424-12669713 REVERSE LENGTH=519