- Predicted Gene MLOC_44755
MLOC_44755 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_44755_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_44755_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.77978 | 11.9595 | 9.44926 | 11.968 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 762.193 | 1503.52 | 1473.03 | 1187.39 |
INF1 | Young developing inflorescences (5mm) | 27.1626 | 27.303 | 31.7226 | 30.7811 |
INF2 | Developing inflorescences (1-1.5 cm) | 19.2276 | 21.6802 | 33.3715 | 32.8541 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.94982 | 5.81108 | 19.1685 | 9.34111 |
NOD | Developing tillers at six leaf stage, 3rd internode | 643.635 | 837.081 | 1138.49 | 2863.74 |
CAR5 | Developing grain, bracts removed (5 DPA) | 155.505 | 166.014 | 157.159 | 196.472 |
CAR15 | Developing grain, bracts removed (15 DPA) | 28.7319 | 38.7317 | 33.4309 | 101.528 |
CDS Structure of MLOC_44755
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44755.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g33820.1 |
+3 |
2e-137 |
395 |
189/222 (85%) |
13108.m03529 protein chlorophyll A-B binding protein, putative, expressed |
TAIR PP10 |
AT3G47470.1 |
+3 |
2e-125 |
365 |
176/227 (78%) |
| Symbols: LHCA4, CAB4 | light-harvesting chlorophyll-protein complex I subunit A4 | chr3:17493622-17494773 REVERSE LENGTH=251 |