- Predicted Gene MLOC_44740
MLOC_44740 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.72097 | 4.0622 | 3.9316 | 3.42287 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.65752 | 3.10545 | 0.861355 | 1.47306 |
INF1 | Young developing inflorescences (5mm) | 1.39625 | 2.14587 | 1.20706 | 1.24592 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.9768 | 1.96525 | 1.1502 | 2.19615 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.53663 | 3.10567 | 4.02199 | 3.62514 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.98123 | 0.00692454 | 0.80201 | 0.51472 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.99225 | 4.14016 | 2.22443 | 3.19653 |
CAR15 | Developing grain, bracts removed (15 DPA) | 15227.6 | 16011.2 | 14758.2 | 32322.9 |
CDS Structure of MLOC_44740
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44740.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g31280.1 |
+1 |
7e-29 |
111 |
57/136 (42%) |
13106.m03236 protein THION1 - Plant thionin family protein precursor, putative |
TAIR PP10 |
AT5G36910.1 |
+1 |
2e-15 |
74 |
44/124 (35%) |
| Symbols: THI2.2 | thionin 2.2 | chr5:14562053-14562673 REVERSE LENGTH=134 |