MLOC_44740 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.720974.06223.93163.42287
LEAShoots from the seedlings (10 cm shoot stage)1.657523.105450.8613551.47306
INF1Young developing inflorescences (5mm)1.396252.145871.207061.24592
INF2Developing inflorescences (1-1.5 cm)2.97681.965251.15022.19615
ROORoots from the seedlings (10 cm shoot stage)2.536633.105674.021993.62514
NODDeveloping tillers at six leaf stage, 3rd internode1.981230.006924540.802010.51472
CAR5Developing grain, bracts removed (5 DPA)3.992254.140162.224433.19653
CAR15Developing grain, bracts removed (15 DPA)15227.616011.214758.232322.9



CDS Structure of MLOC_44740






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44740.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374439NoneNoneNoneNone
MLOC_44740.1CUST_2682_PI427708080AvailableAvailablecontig_275278 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g31280.1 +1 7e-29 111 57/136 (42%) 13106.m03236 protein THION1 - Plant thionin family protein precursor, putative
TAIR PP10 AT5G36910.1 +1 2e-15 74 44/124 (35%) | Symbols: THI2.2 | thionin 2.2 | chr5:14562053-14562673 REVERSE LENGTH=134