MLOC_44696 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2700110.09078480.2563170.174893
LEAShoots from the seedlings (10 cm shoot stage)0.05115280.1127450.2085660.115006
INF1Young developing inflorescences (5mm)0.08021780.11720.2317530.122337
INF2Developing inflorescences (1-1.5 cm)0.2985990.1191740.4533850.275173
ROORoots from the seedlings (10 cm shoot stage)00.1415090.1812290.212143
NODDeveloping tillers at six leaf stage, 3rd internode0.06801020.09866880.04942540.255434
CAR5Developing grain, bracts removed (5 DPA)1.706273.284943.058912.54706
CAR15Developing grain, bracts removed (15 DPA)83.804259.349169.6046165.255



CDS Structure of MLOC_44696






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44696.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249922.1NoneNoneNoneNone
MLOC_44696.1CUST_233_PI427708083AvailableAvailablecontig_275196 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g37160.1 -2 1e-20 57 35/44 (80%) 13106.m03848 protein transmembrane 9 superfamily member, putative, expressed
TAIR PP10 AT2G24170.1 -3 2e-23 61 30/46 (65%) Endomembrane protein 70 protein family | chr2:10274307-10276894 REVERSE LENGTH=637