MLOC_44690 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.336493.736914.2234.84467
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.0337575000.0303469
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.883210.9105042.442031.44171
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.2664980.4663760.2490510.394315
CAR15Developing grain, bracts removed (15 DPA)1.144670.3500962.464933.1737



CDS Structure of MLOC_44690






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44690.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44690.1CUST_12255_PI427708080AvailableAvailablecontig_275185 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g44820.3 -2 9e-108 318 165/202 (82%) 13102.m05019 protein rho-GTPase-activating protein-related, putative, expressed
TAIR PP10 AT4G35750.1 -2 4e-63 202 95/196 (48%) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr4:16940865-16941674 REVERSE LENGTH=202