- Predicted Gene MLOC_44688
MLOC_44688 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.576045 | 2.63023 | 2.53317 | 1.93083 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.975746 | 0.178229 | 0.201868 | 0.383432 |
INF1 | Young developing inflorescences (5mm) | 0.168401 | 0.116553 | 0.161594 | 0.119796 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.242548 | 0.17223 | 0.0788881 | 0.185255 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.891141 | 2.12121 | 1.31933 | 1.98289 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.14455 | 0.950172 | 0.501397 | 2.48849 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.93921 | 3.097 | 3.75597 | 2.89519 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.417227 | 0.232571 | 0.54617 | 0.848965 |
CDS Structure of MLOC_44688
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44688.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g52550.1 |
+3 |
2e-67 |
244 |
127/152 (84%) |
13101.m05501 protein ABC transporter, ATP-binding protein, putative, expressed |
TAIR PP10 |
AT3G28345.1 |
+3 |
8e-31 |
130 |
66/146 (45%) |
ABC transporter family protein | chr3:10593921-10598775 REVERSE LENGTH=1240 |