MLOC_44661 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.13457000.140127
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.03326940.037001300.0327958
INF2Developing inflorescences (1-1.5 cm)0.0655153000.0814886
ROORoots from the seedlings (10 cm shoot stage)0.168787000.123764
NODDeveloping tillers at six leaf stage, 3rd internode000.009915040.0220787
CAR5Developing grain, bracts removed (5 DPA)11.03077.661187.093417.9708
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_44661






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44661.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44661.1CUST_12253_PI427708080AvailableAvailablecontig_275121 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g38470.1 -2 2e-120 361 179/358 (50%) 13103.m04172 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT5G55050.1 -2 4e-77 248 135/346 (39%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:22337745-22339741 FORWARD LENGTH=376