- Predicted Gene MLOC_44626
MLOC_44626 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.25805 | 4.85434 | 4.43854 | 4.90389 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.57105 | 3.67515 | 5.37754 | 3.08541 |
| INF1 | Young developing inflorescences (5mm) | 3.37901 | 2.59344 | 3.06724 | 1.9884 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.53143 | 2.73681 | 2.29126 | 2.2713 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.83629 | 5.65863 | 3.12001 | 5.67277 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.78295 | 4.73936 | 4.93316 | 12.0053 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.03138 | 1.26236 | 2.11637 | 1.32516 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.414102 | 0.141698 | 1.0173 | 0.801151 |
CDS Structure of MLOC_44626
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44626.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g46932.1 |
+3 |
4e-16 |
75 |
37/39 (95%) |
13101.m04829 protein vacuolar protein-sorting-associated protein 25, putative, expressed |
| TAIR PP10 |
AT4G19003.1 |
+3 |
2e-13 |
66 |
32/40 (80%) |
| Symbols: VPS25 | E2F/DP family winged-helix DNA-binding domain | chr4:10407571-10408582 REVERSE LENGTH=179 |