- Predicted Gene MLOC_44617
MLOC_44617 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 89.2533 | 89.1557 | 85.0034 | 100.991 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 47.3365 | 24.534 | 23.9377 | 31.9131 |
| INF1 | Young developing inflorescences (5mm) | 334.018 | 314.206 | 310.066 | 301.134 |
| INF2 | Developing inflorescences (1-1.5 cm) | 190.769 | 186.91 | 189.956 | 235.198 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 30.0552 | 87.3194 | 77.9493 | 124.047 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.711246 | 0.884872 | 3.62339 | 5.82182 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 98.5086 | 90.4608 | 99.9087 | 109.551 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 20.4504 | 18.3242 | 17.6659 | 47.5326 |
CDS Structure of MLOC_44617
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44617.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g22740.1 |
+2 |
0.0 |
796 |
424/469 (90%) |
13103.m02743 protein nucleolar protein NOP5-1, putative |
| TAIR PP10 |
AT3G05060.1 |
+2 |
0.0 |
689 |
363/473 (77%) |
NOP56-like pre RNA processing ribonucleoprotein | chr3:1413174-1415564 REVERSE LENGTH=533 |