MLOC_44602 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains398.147257.672310.41292.229
LEAShoots from the seedlings (10 cm shoot stage)145.318132.104183.347112.001
INF1Young developing inflorescences (5mm)89.309694.0223103.7582.4226
INF2Developing inflorescences (1-1.5 cm)78.534581.673480.056185.7202
ROORoots from the seedlings (10 cm shoot stage)298.635197.103178.034207.372
NODDeveloping tillers at six leaf stage, 3rd internode156.014166.741139.077335.122
CAR5Developing grain, bracts removed (5 DPA)164.112199.364168.236172.479
CAR15Developing grain, bracts removed (15 DPA)30.301423.470627.398367.0345



CDS Structure of MLOC_44602






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44602.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360833NoneNoneNoneNone
MLOC_44602.1CUST_2670_PI427708080AvailableAvailablecontig_275010 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g06890.1 -2 7e-74 228 162/165 (98%) 13111.m00699 protein vacuolar ATP synthase, putative, expressed
TAIR PP10 AT1G19910.1 -2 3e-71 220 159/165 (96%) | Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | ATPase, F0/V0 complex, subunit C protein | chr1:6913317-6914322 FORWARD LENGTH=165