- Predicted Gene MLOC_44602
MLOC_44602 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_44602_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_44602_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 398.147 | 257.672 | 310.41 | 292.229 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 145.318 | 132.104 | 183.347 | 112.001 |
INF1 | Young developing inflorescences (5mm) | 89.3096 | 94.0223 | 103.75 | 82.4226 |
INF2 | Developing inflorescences (1-1.5 cm) | 78.5345 | 81.6734 | 80.0561 | 85.7202 |
ROO | Roots from the seedlings (10 cm shoot stage) | 298.635 | 197.103 | 178.034 | 207.372 |
NOD | Developing tillers at six leaf stage, 3rd internode | 156.014 | 166.741 | 139.077 | 335.122 |
CAR5 | Developing grain, bracts removed (5 DPA) | 164.112 | 199.364 | 168.236 | 172.479 |
CAR15 | Developing grain, bracts removed (15 DPA) | 30.3014 | 23.4706 | 27.3983 | 67.0345 |
CDS Structure of MLOC_44602
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44602.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g06890.1 |
-2 |
7e-74 |
228 |
162/165 (98%) |
13111.m00699 protein vacuolar ATP synthase, putative, expressed |
TAIR PP10 |
AT1G19910.1 |
-2 |
3e-71 |
220 |
159/165 (96%) |
| Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | ATPase, F0/V0 complex, subunit C protein | chr1:6913317-6914322 FORWARD LENGTH=165 |