- Predicted Gene MLOC_44536
MLOC_44536 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_44536_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_44536_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.27946 | 4.79263 | 6.53915 | 6.59063 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 76.8528 | 10.1806 | 3.9215 | 25.956 |
INF1 | Young developing inflorescences (5mm) | 0.367411 | 0.0828493 | 0.0477951 | 0.155711 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.94822 | 2.73493 | 2.38863 | 3.48634 |
ROO | Roots from the seedlings (10 cm shoot stage) | 264.709 | 155.075 | 104.26 | 221.781 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0326054 | 0.0775284 | 0.098497 | 0.292207 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.17333 | 11.9045 | 13.9151 | 13.1649 |
CAR15 | Developing grain, bracts removed (15 DPA) | 415.05 | 462.337 | 382.504 | 1156.61 |
CDS Structure of MLOC_44536
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44536.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g04370.1 |
-1 |
7e-60 |
192 |
128/152 (84%) |
13101.m00396 protein hsp20/alpha crystallin family protein, putative, expressed |
TAIR PP10 |
AT5G59720.1 |
-1 |
4e-49 |
164 |
110/150 (73%) |
| Symbols: HSP18.2 | heat shock protein 18.2 | chr5:24062632-24063117 FORWARD LENGTH=161 |