- Predicted Gene MLOC_44532
MLOC_44532 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 19.3166 | 13.6894 | 13.252 | 11.4259 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.9664 | 5.19166 | 6.32524 | 5.1714 |
INF1 | Young developing inflorescences (5mm) | 10.1212 | 10.7752 | 8.70307 | 5.95431 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.86432 | 5.34915 | 5.26785 | 4.11224 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.2867 | 12.2639 | 14.253 | 10.4901 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.3247 | 8.13968 | 8.58793 | 20.6646 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.00416 | 9.60902 | 7.76515 | 5.60671 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.39379 | 1.15832 | 1.52878 | 2.17654 |
CDS Structure of MLOC_44532
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44532.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g33100.1 |
-3 |
5e-62 |
211 |
123/163 (75%) |
13111.m03235 protein SNARE associated Golgi protein, putative, expressed |
TAIR PP10 |
AT1G44960.1 |
-3 |
5e-37 |
140 |
76/161 (47%) |
SNARE associated Golgi protein family | chr1:16999576-17001447 FORWARD LENGTH=261 |