MLOC_44491 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.373453.52853.072252.4006
LEAShoots from the seedlings (10 cm shoot stage)38.63238.571332.781233.3194
INF1Young developing inflorescences (5mm)55.024155.598950.269146.8434
INF2Developing inflorescences (1-1.5 cm)49.677152.841648.847258.1743
ROORoots from the seedlings (10 cm shoot stage)19.821135.785530.817343.9152
NODDeveloping tillers at six leaf stage, 3rd internode39.768731.212325.0039108.111
CAR5Developing grain, bracts removed (5 DPA)44.214343.076745.65345.4264
CAR15Developing grain, bracts removed (15 DPA)11.653111.144211.897927.0357



CDS Structure of MLOC_44491






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44491.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363675NoneNoneNoneNone
MLOC_44491.1CUST_2656_PI427708080AvailableAvailablecontig_274816 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g40860.1 +2 0.0 791 422/467 (90%) 13102.m04558 protein CK1_CaseinKinase_1.5 - CK1 includes the casein kinase 1 kinases, expressed
TAIR PP10 AT4G14340.1 +2 0.0 606 310/470 (66%) | Symbols: CKI1, CKL11 | casein kinase I | chr4:8248532-8251668 REVERSE LENGTH=457