MLOC_44490 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.666025.120683.671644.34501
LEAShoots from the seedlings (10 cm shoot stage)4.240486.7565.961223.9348
INF1Young developing inflorescences (5mm)2.865282.725572.270031.96819
INF2Developing inflorescences (1-1.5 cm)3.185364.053423.03293.27006
ROORoots from the seedlings (10 cm shoot stage)9.462274.987842.687885.31416
NODDeveloping tillers at six leaf stage, 3rd internode4.183467.219948.8634518.7211
CAR5Developing grain, bracts removed (5 DPA)5.847695.351755.439964.42124
CAR15Developing grain, bracts removed (15 DPA)3.913243.116153.274737.07723



CDS Structure of MLOC_44490






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44490.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44490.1CUST_12232_PI427708080AvailableAvailablecontig_274816 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g40870.2 +2 2e-150 434 255/291 (88%) 13102.m04560 protein phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed
TAIR PP10 AT2G34980.1 +2 1e-126 373 217/290 (75%) | Symbols: SETH1 | phosphatidylinositolglycan synthase family protein | chr2:14748967-14749878 FORWARD LENGTH=303