- Predicted Gene MLOC_44490
MLOC_44490 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.66602 | 5.12068 | 3.67164 | 4.34501 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.24048 | 6.756 | 5.96122 | 3.9348 |
| INF1 | Young developing inflorescences (5mm) | 2.86528 | 2.72557 | 2.27003 | 1.96819 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.18536 | 4.05342 | 3.0329 | 3.27006 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.46227 | 4.98784 | 2.68788 | 5.31416 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.18346 | 7.21994 | 8.86345 | 18.7211 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.84769 | 5.35175 | 5.43996 | 4.42124 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.91324 | 3.11615 | 3.27473 | 7.07723 |
CDS Structure of MLOC_44490
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44490.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g40870.2 |
+2 |
2e-150 |
434 |
255/291 (88%) |
13102.m04560 protein phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed |
| TAIR PP10 |
AT2G34980.1 |
+2 |
1e-126 |
373 |
217/290 (75%) |
| Symbols: SETH1 | phosphatidylinositolglycan synthase family protein | chr2:14748967-14749878 FORWARD LENGTH=303 |