- Predicted Gene MLOC_44488
MLOC_44488 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_44488_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_44488_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.68486 | 7.20084 | 7.09311 | 5.83388 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.40924 | 14.0332 | 15.605 | 9.54865 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0313268 | 0 | 0.0234182 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.103405 | 0.048848 | 0.104623 | 0.0765664 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.10588 | 8.68103 | 9.02727 | 8.28049 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.359173 | 0.327326 | 0.416238 | 0.967431 |
CAR5 | Developing grain, bracts removed (5 DPA) | 27.8249 | 30.6478 | 33.7896 | 24.7392 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.26508 | 1.94393 | 2.9365 | 5.32717 |
CDS Structure of MLOC_44488
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44488.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g46310.2 |
+1 |
0.0 |
947 |
493/550 (90%) |
13106.m04889 protein metal transporter Nramp6, putative, expressed |
TAIR PP10 |
AT1G80830.1 |
+1 |
0.0 |
769 |
390/541 (72%) |
| Symbols: NRAMP1, PMIT1, ATNRAMP1 | natural resistance-associated macrophage protein 1 | chr1:30373066-30375644 REVERSE LENGTH=532 |