MLOC_44452 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.2921.388823.02619.2951
LEAShoots from the seedlings (10 cm shoot stage)37.990639.82330.067629.8974
INF1Young developing inflorescences (5mm)35.654433.313230.565826.6496
INF2Developing inflorescences (1-1.5 cm)52.789547.257851.897851.6753
ROORoots from the seedlings (10 cm shoot stage)27.927838.055834.091742.3713
NODDeveloping tillers at six leaf stage, 3rd internode25.269238.673531.9078119.873
CAR5Developing grain, bracts removed (5 DPA)21.75820.72422.902419.7106
CAR15Developing grain, bracts removed (15 DPA)3.720153.838363.964288.11881



CDS Structure of MLOC_44452






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358592
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358592CUST_19990_PI427708080NoneNoneNone
MLOC_2932.1NoneAvailableNonecontig_1262888 (Not mapped)
MLOC_44452.1NoneAvailableAvailablecontig_274755 (Mapped)
MLOC_50305.1NoneAvailableNonecontig_358231 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----