MLOC_44423 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.4908213.803213.058515.1821
LEAShoots from the seedlings (10 cm shoot stage)11.13866.626548.641248.95637
INF1Young developing inflorescences (5mm)34.847336.115334.081534.6819
INF2Developing inflorescences (1-1.5 cm)36.065544.275539.319251.8068
ROORoots from the seedlings (10 cm shoot stage)5.9768512.6139.8634318.3647
NODDeveloping tillers at six leaf stage, 3rd internode6.280069.558348.2676238.1804
CAR5Developing grain, bracts removed (5 DPA)25.112725.094125.158129.1118
CAR15Developing grain, bracts removed (15 DPA)6.049225.407895.8202515.2169



CDS Structure of MLOC_44423






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44423.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44423.2CUST_12223_PI427708080AvailableAvailablecontig_274726 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g18370.1 -3 0.0 711 351/644 (55%) 13102.m02061 protein transposon protein, putative, unclassified, expressed
TAIR PP10 AT2G27110.2 -3 7e-70 250 187/633 (30%) | Symbols: FRS3 | FAR1-related sequence 3 | chr2:11576969-11580405 REVERSE LENGTH=851