MLOC_44399 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.912136.185334.793814.98114
LEAShoots from the seedlings (10 cm shoot stage)3.986513.250823.323762.89825
INF1Young developing inflorescences (5mm)3.853164.027714.855623.35687
INF2Developing inflorescences (1-1.5 cm)4.433055.43285.722925.31507
ROORoots from the seedlings (10 cm shoot stage)16.672319.978715.531521.061
NODDeveloping tillers at six leaf stage, 3rd internode2.179933.465734.5226211.0899
CAR5Developing grain, bracts removed (5 DPA)4.375034.578124.717244.10173
CAR15Developing grain, bracts removed (15 DPA)2.620562.05542.445845.2096



CDS Structure of MLOC_44399






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369415
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369415CUST_25339_PI427708080NoneNoneNone
MLOC_34355.2NoneAvailableNonecontig_243634 (Mapped)
MLOC_44253.2NoneAvailableNonecontig_274396 (Mapped)
MLOC_44399.2NoneAvailableAvailablecontig_274673 (Mapped)
MLOC_9684.1NoneAvailableNonecontig_154620 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----