- Predicted Gene MLOC_44354
MLOC_44354 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.71054 | 10.6809 | 8.76713 | 8.26054 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.7697 | 14.8404 | 12.2024 | 12.0357 |
INF1 | Young developing inflorescences (5mm) | 16.4648 | 15.0111 | 15.8513 | 12.7426 |
INF2 | Developing inflorescences (1-1.5 cm) | 19.5029 | 19.3947 | 16.0135 | 19.5806 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.38963 | 6.41641 | 4.35684 | 7.08736 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.0854 | 8.21802 | 9.14736 | 28.6114 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.3882 | 16.2904 | 18.5357 | 16.2993 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.9826 | 8.85631 | 8.81022 | 19.989 |
CDS Structure of MLOC_44354
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44354.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g43120.1 |
+2 |
0.0 |
1170 |
843/1801 (47%) |
13106.m04512 protein zinc finger C-x8-C-x5-C-x3-H type family protein, expressed |
TAIR PP10 |
AT1G21580.1 |
+2 |
7e-117 |
414 |
284/715 (40%) |
Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:7557822-7565655 REVERSE LENGTH=2166 |