MLOC_44345 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.119823.989327.87225.0299
LEAShoots from the seedlings (10 cm shoot stage)4.590188.583185.208525.14594
INF1Young developing inflorescences (5mm)0.5389670.3372560.09863710.306358
INF2Developing inflorescences (1-1.5 cm)0.6976420.6397310.3829610.678686
ROORoots from the seedlings (10 cm shoot stage)6.803436.445249.58298.33058
NODDeveloping tillers at six leaf stage, 3rd internode7.354615.310264.3678613.9759
CAR5Developing grain, bracts removed (5 DPA)2.119442.475371.982032.20702
CAR15Developing grain, bracts removed (15 DPA)0.4697260.600590.3490361.19937



CDS Structure of MLOC_44345






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44345.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44345.1CUST_6211_PI427708083AvailableAvailablecontig_274574 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g48170.1 -3 1e-22 94 46/64 (72%) 13102.m05439 protein class E vacuolar protein-sorting machinery protein HSE1, putative, expressed
TAIR PP10None-----