MLOC_44325 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains73.755470.362568.875772.1719
LEAShoots from the seedlings (10 cm shoot stage)44.685814.524514.925621.5649
INF1Young developing inflorescences (5mm)103.605121.878131.58100.878
INF2Developing inflorescences (1-1.5 cm)66.497974.760677.700580.633
ROORoots from the seedlings (10 cm shoot stage)35.207638.676742.298446.8808
NODDeveloping tillers at six leaf stage, 3rd internode19.72165.4506910.417521.6882
CAR5Developing grain, bracts removed (5 DPA)61.90464.575171.523865.6562
CAR15Developing grain, bracts removed (15 DPA)15.57512.45215.149233.0729



CDS Structure of MLOC_44325






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44325.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249670.1NoneNoneNoneNone
MLOC_44325.2CUST_2638_PI427708080AvailableAvailablecontig_274537 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g10784.2 -3 0.0 542 277/291 (95%) 13112.m01148 protein 2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed
TAIR PP10 AT1G79500.4 -3 1e-176 501 252/289 (87%) | Symbols: AtkdsA1 | Aldolase-type TIM barrel family protein | chr1:29903604-29905989 FORWARD LENGTH=290