MLOC_44309 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3695611.197741.017110.732343
LEAShoots from the seedlings (10 cm shoot stage)1.903181.245431.490771.1503
INF1Young developing inflorescences (5mm)3.92463.931254.994922.84648
INF2Developing inflorescences (1-1.5 cm)6.14256.407544.254095.3049
ROORoots from the seedlings (10 cm shoot stage)0.7482571.108991.011780.993776
NODDeveloping tillers at six leaf stage, 3rd internode0.5957841.196361.321873.18494
CAR5Developing grain, bracts removed (5 DPA)2.126462.660112.260621.82867
CAR15Developing grain, bracts removed (15 DPA)0.4630120.353090.4426720.778753



CDS Structure of MLOC_44309






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44309.9
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44309.9CUST_12208_PI427708080AvailableAvailablecontig_274512 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g38670.1 -2 0.0 1066 568/835 (68%) 13106.m04008 protein receptor-like protein kinase precursor, putative
TAIR PP10 AT5G46330.1 -2 3e-130 432 293/862 (34%) | Symbols: FLS2 | Leucine-rich receptor-like protein kinase family protein | chr5:18791802-18795407 FORWARD LENGTH=1173