MLOC_44273 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2594170.1787310.5020950.330232
LEAShoots from the seedlings (10 cm shoot stage)0.4418370.49346100.419105
INF1Young developing inflorescences (5mm)00.04277740.04860070.0962385
INF2Developing inflorescences (1-1.5 cm)000.8852240.840371
ROORoots from the seedlings (10 cm shoot stage)1.150250.5124431.178550.894379
NODDeveloping tillers at six leaf stage, 3rd internode0.06680310.1577540.1851170.544049
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)00.043617100.156017



CDS Structure of MLOC_44273






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44273.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44273.2CUST_6199_PI427708083AvailableAvailablecontig_274442 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g35310.1 +3 3e-158 462 229/274 (84%) 13107.m03609 protein TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed
TAIR PP10 AT4G23180.1 +3 2e-113 346 163/267 (61%) | Symbols: CRK10, RLK4 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | chr4:12138171-12140780 FORWARD LENGTH=669