MLOC_44256 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains121.264159.689168.845147.133
LEAShoots from the seedlings (10 cm shoot stage)103.38165.08376.012470.2799
INF1Young developing inflorescences (5mm)18.90217.582814.928914.0195
INF2Developing inflorescences (1-1.5 cm)14.244713.639314.357614.7845
ROORoots from the seedlings (10 cm shoot stage)99.8097153.843143.028169.505
NODDeveloping tillers at six leaf stage, 3rd internode383.617380.81104.7151117.91
CAR5Developing grain, bracts removed (5 DPA)106.77798.756291.605292.4629
CAR15Developing grain, bracts removed (15 DPA)14.431911.132524.837533.1689



CDS Structure of MLOC_44256






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44256.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252848.1NoneNoneNoneNone
MLOC_44256.2CUST_2631_PI427708080AvailableAvailablecontig_274407 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g03730.3 +3 0.0 1166 579/659 (88%) 13111.m00315 protein alpha-N-arabinofuranosidase A, putative, expressed
TAIR PP10 AT3G10740.1 +3 0.0 840 415/645 (64%) | Symbols: ASD1, ARAF1, ARAF, ATASD1 | alpha-L-arabinofuranosidase 1 | chr3:3361031-3364573 REVERSE LENGTH=678